Transcript: lnc-EMB-4:2

Basic information

LNCipedia transcript ID: lnc-EMB-4:2 
LNCipedia gene ID: lnc-EMB-4
Ensembl Gene ID: ENSG00000259663
Ensembl Transcript ID: ENST00000559112
Location (hg38): chr5:51377068-51383332
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 2367 bp
Exons: 2
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000559112.2
Alternative gene names: ENSG00000259663.2; CTD-2314G24.2; AC010478.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -128.7623 non-coding 
CPAT coding probability 4.10% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-EMB-4:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-EMB-4:2
4.0 lnc-EMB-4:2
4.1 lnc-EMB-4:2
5.0 lnc-EMB-4:2
5.1 lnc-ACTBL2-59:3
5.2 lnc-EMB-4:2