Transcript: lnc-ERGIC1-5:1

Basic information

LNCipedia transcript ID: lnc-ERGIC1-5:1 
LNCipedia gene ID: lnc-ERGIC1-5
Location (hg38): chr5:172657249-172659337
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 2078 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT105129
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 8.1607 non-coding 
CPAT coding probability 3.60% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ERGIC1-5:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ERGIC1-5:1
4.0 lnc-ERGIC1-5:1
4.1 lnc-ERGIC1-5:1
5.0 lnc-ERGIC1-5:1
5.1 lnc-ATP6V0E1-17:1
5.2 lnc-ERGIC1-5:1