Transcript: lnc-ERV3-1-10:10

Basic information

LNCipedia transcript ID: lnc-ERV3-1-10:10 
LNCipedia gene ID: lnc-ERV3-1-10
Location (hg38): chr7:65722648-65750924
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2000 bp
Exons: 5
Sources: NONCODE v4
Alternative transcript names: NONHSAT121101
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 26.5292 non-coding 
CPAT coding probability 3.03% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ERV3-1-10:10 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-GUSB-5:8
4.0 lnc-ERV3-1-10:10
4.1 lnc-ERV3-1-10:10
5.0 lnc-ERV3-1-10:10
5.1 lnc-TRIM74-105:10
5.2 lnc-ERV3-1-10:10