Transcript: lnc-ERV3-1-10:11

Basic information

LNCipedia transcript ID: lnc-ERV3-1-10:11 
LNCipedia gene ID: lnc-ERV3-1-10
Location (hg38): chr7:65715497-65750915
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 613 bp
Exons: 4
Sources: NONCODE v4; Refseq - Dec 2014
Alternative transcript names: NONHSAT121099; NR_103527
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -128.6636 non-coding 
CPAT coding probability 3.30% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ERV3-1-10:11 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-GUSB-5:9
4.0 lnc-ERV3-1-10:11
4.1 lnc-ERV3-1-10:11
5.0 lnc-ERV3-1-10:11
5.1 lnc-TRIM74-105:12
5.2 lnc-ERV3-1-10:11