Transcript: lnc-ERV3-1-10:13

Basic information

LNCipedia transcript ID: lnc-ERV3-1-10:13 
LNCipedia gene ID: lnc-ERV3-1-10
Location (hg38): chr7:65722032-65727151
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 474 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT121100
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -15.5373 non-coding 
CPAT coding probability 2.86% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ERV3-1-10:13 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-GUSB-5:11
4.0 lnc-ERV3-1-10:13
4.1 lnc-ERV3-1-10:13
5.0 lnc-ERV3-1-10:13
5.1 lnc-TRIM74-105:13
5.2 lnc-ERV3-1-10:13