Transcript: lnc-ERV3-1-10:18

Basic information

LNCipedia transcript ID: lnc-ERV3-1-10:18 
LNCipedia gene ID: lnc-ERV3-1-10
RefSeq ID: NR_103527
Location (hg38): chr7:65714611-65750924
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1508 bp
Exons: 4
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_103527.2
Alternative gene names: LOC441242


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -35.1741 non-coding 
CPAT coding probability 0.62% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ERV3-1-10:18 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-TRIM74-105:11
5.1 lnc-TRIM74-105:11
5.2 lnc-ERV3-1-10:18