Transcript: lnc-ERV3-1-10:5

Basic information

LNCipedia transcript ID: lnc-ERV3-1-10:5 
LNCipedia gene ID: lnc-ERV3-1-10
Location (hg38): chr7:65767384-65770798
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 440 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT121114
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -71.6054 non-coding 
CPAT coding probability 17.44% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ERV3-1-10:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-GUSB-5:5
4.0 lnc-ERV3-1-10:5
4.1 lnc-ERV3-1-10:5
5.0 lnc-ERV3-1-10:5
5.1 lnc-TRIM74-105:5
5.2 lnc-ERV3-1-10:5