Transcript: lnc-EXOC2-24:1

Basic information

LNCipedia transcript ID: lnc-EXOC2-24:1 
LNCipedia gene ID: lnc-EXOC2-24
Ensembl Gene ID: ENSG00000270937
Ensembl Transcript ID: ENST00000603854
Location (hg38): chr6:1026494-1027225
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 732 bp
Exons: 1
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT106351; ENST00000603854.1
Alternative gene names: ENSG00000270937.1; RP5-856G1.1; AL033381.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -371.4832 non-coding 
CPAT coding probability 0.50% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-EXOC2-24:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-EXOC2-24:1
4.0 lnc-EXOC2-24:1
4.1 lnc-EXOC2-24:1
5.0 lnc-EXOC2-24:1
5.1 lnc-ECI2-180:1
5.2 lnc-EXOC2-24:1