Transcript: lnc-FAM20C-7:1

Basic information

LNCipedia transcript ID: lnc-FAM20C-7:1 
LNCipedia gene ID: lnc-FAM20C-7
Location (hg38): chr7:425490-428084
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1031 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00013289; NONHSAT118632
Alternative gene names: XLOC_005957; linc-HEATR2-3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 30.1513 non-coding 
CPAT coding probability 10.42% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FAM20C-7:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-FAM20C-7:1
3.1 lnc-FAM20C-7:1
4.0 lnc-FAM20C-7:1
4.1 lnc-FAM20C-7:1
5.0 lnc-FAM20C-7:1
5.1 lnc-GPER1-33:1
5.2 lnc-FAM20C-7:1