Transcript: lnc-NXPE4-3:1

Basic information

LNCipedia transcript ID: lnc-NXPE4-3:1 
LNCipedia gene ID: lnc-NXPE4-3
Location (hg38): chr11:115262659-115265835
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 982 bp
Exons: 3
Sources: Nielsen et al.,2014
Alternative transcript names: ucscGeneNc_uc009yzb_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -115.3576 non-coding 
CPAT coding probability 2.45% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NXPE4-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FAM55D-3:1
4.0 lnc-FAM55D-3:1
4.1 lnc-FAM55D-3:1
5.0 lnc-FAM55D-3:1
5.1 lnc-DRD2-34:1
5.2 lnc-NXPE4-3:1