Transcript: lnc-FAM92B-3:1

Basic information

LNCipedia transcript ID: lnc-FAM92B-3:1 
LNCipedia gene ID: lnc-FAM92B-3
Location (hg38): chr16:85345281-85353647
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1265 bp
Exons: 2
Sources: Broad Institute
Alternative transcript names: TCONS_00024750
Alternative gene names: XLOC_012035; linc-FAM92B-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -56.0913 non-coding 
CPAT coding probability 29.19% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FAM92B-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-FAM92B-3:1
3.1 lnc-FAM92B-3:1
4.0 lnc-FAM92B-3:1
4.1 lnc-FAM92B-3:1
5.0 lnc-FAM92B-3:1
5.1 lnc-MTHFSD-23:1
5.2 lnc-FAM92B-3:1