Transcript: lnc-FAM98A-3:2

Basic information

LNCipedia transcript ID: lnc-FAM98A-3:2 
LNCipedia gene ID: lnc-FAM98A-3
Ensembl Gene ID: ENSG00000237320
Ensembl Transcript ID: ENST00000414796
Location (hg38): chr2:34998273-35000160
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 499 bp
Exons: 3
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000414796.2
Alternative gene names: ENSG00000237320.2; AC019064.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -449.8669 non-coding 
CPAT coding probability 0.32% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FAM98A-3:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-FAM98A-3:2
4.1 lnc-FAM98A-3:2
5.0 lnc-FAM98A-3:2
5.1 lnc-MAP4K3-82:2
5.2 lnc-FAM98A-3:2