Transcript: lnc-KLF13-2:6

Basic information

LNCipedia transcript ID: lnc-KLF13-2:6 
LNCipedia gene ID: lnc-KLF13-2
Location (hg38): chr15:31392843-31403908
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1010 bp
Exons: 3
Sources: Broad Institute
Alternative transcript names: TCONS_00023218
Alternative gene names: XLOC_011202; linc-CHRNA7


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -87.2504 non-coding 
CPAT coding probability 28.09% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-KLF13-2:6 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-FAN1-1:2
3.1 lnc-FAN1-2:2
4.0 lnc-KLF13-2:6
4.1 lnc-KLF13-2:6
5.0 lnc-KLF13-2:6
5.1 lnc-SNRPN-132:5
5.2 lnc-KLF13-2:6