Transcript: lnc-FGF10-4:1

Basic information

LNCipedia transcript ID: lnc-FGF10-4:1 
LNCipedia gene ID: lnc-FGF10-4
Location (hg38): chr5:45266724-45268013
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 418 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000503959.1; RP11-454E7.1-001; OTTHUMT00000367517.1; NONHSAT101359
Alternative gene names: ENSG00000251117.1; RP11-454E7.1; OTTHUMG00000162145.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -61.4369 non-coding 
CPAT coding probability 0.92% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FGF10-4:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FGF10-4:1
4.0 lnc-FGF10-4:1
4.1 lnc-FGF10-4:1
5.0 lnc-FGF10-4:1
5.1 lnc-SELENOP-40:1
5.2 lnc-FGF10-4:1