Transcript: lnc-FOXC1-10:6

Basic information

LNCipedia transcript ID: lnc-FOXC1-10:6 
LNCipedia gene ID: lnc-FOXC1-10
Location (hg38): chr6:1942451-1962436
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1609 bp
Exons: 11
Sources: NONCODE v4
Alternative transcript names: NONHSAT106568
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -55.5267 non-coding 
CPAT coding probability 1.65% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FOXC1-10:6 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FOXC1-10:6
4.0 lnc-FOXC1-10:6
4.1 lnc-FOXC1-10:6
5.0 lnc-FOXC1-10:6
5.1 lnc-RIPK1-88:6
5.2 lnc-FOXC1-10:6