Transcript: lnc-FOXG1-21:1

Basic information

LNCipedia transcript ID: lnc-FOXG1-21:1 
LNCipedia gene ID: lnc-FOXG1-21
Location (hg38): chr14:27999713-28038160
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 473 bp
Exons: 3
Sources: Nielsen et al.,2014
Alternative transcript names: l_957_chr14:28468918-28507366_testes
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -177.7038 non-coding 
CPAT coding probability 1.46% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-FOXG1-21:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FOXG1-12:1
4.0 lnc-FOXG1-12:1
4.1 lnc-FOXG1-12:1
5.0 lnc-FOXG1-12:1
5.1 lnc-G2E3-25:1
5.2 lnc-FOXG1-21:1