Transcript: lnc-IGSF1-2:2

Basic information

LNCipedia transcript ID: lnc-IGSF1-2:2 
LNCipedia gene ID: lnc-IGSF1-2
Location (hg38): chrX:131810578-131812180
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 636 bp
Exons: 2
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT138554; FPKM1_group_35315_transcript_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -0.3112 non-coding 
CPAT coding probability 0.10% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-IGSF1-2:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FRMD7-2:1
4.0 lnc-FRMD7-2:1
4.1 lnc-FRMD7-2:1
5.0 lnc-FRMD7-2:1
5.1 lnc-HS6ST2-9:1
5.2 lnc-IGSF1-2:2