Transcript: lnc-FZD10-3:1

Basic information

LNCipedia transcript ID: lnc-FZD10-3:1 
LNCipedia gene ID: lnc-FZD10-3
Location (hg38): chr12:129957577-129961061
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 896 bp
Exons: 3
Sources: Broad Institute
Alternative transcript names: TCONS_00020652
Alternative gene names: XLOC_009952; linc-FZD10-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -129.47 non-coding 
CPAT coding probability 52.49% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-FZD10-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-FZD10-3:1
3.1 lnc-FZD10-3:1
4.0 lnc-FZD10-3:1
4.1 lnc-FZD10-3:1
5.0 lnc-FZD10-3:1
5.1 lnc-RAN-15:1
5.2 lnc-FZD10-3:1