Transcript: LINC01933:9

Basic information

LNCipedia transcript ID: LINC01933:9 
LNCipedia gene ID: LINC01933
RefSeq ID: NR_109876
Location (hg38): chr5:151958898-152270449
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 403 bp
Exons: 3
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_109876; NR_109876.1
Alternative gene names: CTB-12O2.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -42.7547 non-coding 
CPAT coding probability 6.09% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01933:9 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-G3BP1-4:5
4.0 lnc-G3BP1-4:5
4.1 lnc-G3BP1-4:5
5.0 lnc-G3BP1-4:5
5.1 LINC01933:4
5.2 LINC01933:9