Transcript: lnc-GPR39-8:1

Basic information

LNCipedia transcript ID: lnc-GPR39-8:1 
LNCipedia gene ID: lnc-GPR39-8
Location (hg38): chr2:132278168-132278531
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 364 bp
Exons: 1
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT074521; FPKM1_group_17235_transcript_2
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 50.04 non-coding 
CPAT coding probability 2.47% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-GPR39-8:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-GPR39-8:1
4.0 lnc-GPR39-8:1
4.1 lnc-GPR39-8:1
5.0 lnc-GPR39-8:1
5.1 lnc-GPR17-76:1
5.2 lnc-GPR39-8:1