Transcript: GPRC5D-AS1:37

Basic information

LNCipedia transcript ID: GPRC5D-AS1:37 
LNCipedia gene ID: GPRC5D-AS1
Location (hg38): chr12:12979875-12980552
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 567 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT027027
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -121.2292 non-coding 
CPAT coding probability 3.33% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
GPRC5D-AS1:37 no no no no

Available literature

  1. Jin (2017), Association between genetic variants in the promoter region of a novel antisense long noncoding RNA RP11-392P7.6 and colorectal cancer risk., Environ. Mol. Mutagen.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-GPRC5A-2:14
4.0 lnc-GPRC5A-2:14
4.1 lnc-GPRC5A-2:14
5.0 lnc-GPRC5A-2:14
5.1 GPRC5D-AS1:23
5.2 GPRC5D-AS1:37