Transcript: lnc-GPRIN1-3:1

Basic information

LNCipedia transcript ID: lnc-GPRIN1-3:1 
LNCipedia gene ID: lnc-GPRIN1-3
Location (hg38): chr5:176589978-176595467
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 5490 bp
Exons: 1
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA1148:1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -35.6294 non-coding 
CPAT coding probability 99.26% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-GPRIN1-3:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-GPRIN1-3:1
4.1 lnc-GPRIN1-3:1
5.0 lnc-GPRIN1-3:1
5.1 lnc-PDLIM7-38:1
5.2 lnc-GPRIN1-3:1