Transcript: LINC02436:15

Basic information

LNCipedia transcript ID: LINC02436:15 
HGNC Gene Symbol: LINC02436    
HGNC Full Gene Name: long intergenic non-protein coding RNA 2436
Ensembl Gene ID: ENSG00000250754
Ensembl Transcript ID: ENST00000511746
Location (hg38): chr4:185062457-185072073
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1192 bp
Exons: 5
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000511746.1; RP11-386B13.3-003; OTTHUMT00000360800.1; NONHSAT099598
Alternative gene names: ENSG00000250754.1; RP11-386B13.3; OTTHUMG00000160487.2; ENSG00000250754.5; LINC02436


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -12.5773 non-coding 
CPAT coding probability 4.34% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02436:15 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-HELT-2:3
4.0 lnc-HELT-2:3
4.1 lnc-HELT-2:3
5.0 lnc-HELT-2:3
5.1 LINC02436:8
5.2 LINC02436:15