Transcript: lnc-HRH4-2:2

Basic information

LNCipedia transcript ID: lnc-HRH4-2:2 
LNCipedia gene ID: lnc-HRH4-2
Location (hg38): chr18:24500459-24501344
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 298 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00026607; NONHSAT058706
Alternative gene names: XLOC_012643; linc-PSMA8-4


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -108.009 non-coding 
CPAT coding probability 7.29% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-HRH4-2:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-HRH4-2:2
3.1 lnc-HRH4-2:2
4.0 lnc-HRH4-2:2
4.1 lnc-HRH4-2:2
5.0 lnc-HRH4-2:2
5.1 lnc-RIOK3-30:3
5.2 lnc-HRH4-2:2