Transcript: lnc-IRF2BP2-4:1

Basic information

LNCipedia transcript ID: lnc-IRF2BP2-4:1 
LNCipedia gene ID: lnc-IRF2BP2-4
Location (hg38): chr1:234621194-234657218
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2123 bp
Exons: 5
Sources: NONCODE v4
Alternative transcript names: NONHSAT010292
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 29.9233 non-coding 
CPAT coding probability 9.20% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-IRF2BP2-4:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-IRF2BP2-4:1
4.0 lnc-IRF2BP2-4:1
4.1 lnc-IRF2BP2-4:1
5.0 lnc-IRF2BP2-4:1
5.1 lnc-SIPA1L2-31:1
5.2 lnc-IRF2BP2-4:1