Transcript: lnc-IRS2-5:1

Basic information

LNCipedia transcript ID: lnc-IRS2-5:1 
LNCipedia gene ID: lnc-IRS2-5
Location (hg38): chr13:109661988-109668510
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 6523 bp
Exons: 1
Sources: Nielsen et al.,2014
Alternative transcript names: l_916_NR_027701
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 2.0371 non-coding 
CPAT coding probability 13.03% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-IRS2-5:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-IRS2-5:1
4.0 lnc-IRS2-5:1
4.1 lnc-IRS2-5:1
5.0 lnc-IRS2-5:1
5.1 lnc-IRS2-5:1
5.2 lnc-IRS2-5:1