Transcript: lnc-ITGB8-2:9

Basic information

LNCipedia transcript ID: lnc-ITGB8-2:9 
LNCipedia gene ID: lnc-ITGB8-2
Location (hg38): chr7:20217687-20221702
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 814 bp
Exons: 4
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA1215:1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -267.7939 non-coding 
CPAT coding probability 3.81% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ITGB8-2:9 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-ITGB8-2:9
4.1 lnc-ITGB8-2:9
5.0 lnc-ITGB8-2:9
5.1 lnc-AHR-34:14
5.2 lnc-ITGB8-2:9