Transcript: lnc-ITPR3-9:3

Basic information

LNCipedia transcript ID: lnc-ITPR3-9:3 
LNCipedia gene ID: lnc-ITPR3-9
Location (hg38): chr6:33870044-33874736
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3787 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT109066
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -79.0258 non-coding 
CPAT coding probability 53.86% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-ITPR3-9:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ITPR3-3:3
4.0 lnc-ITPR3-3:3
4.1 lnc-ITPR3-3:3
5.0 lnc-ITPR3-3:3
5.1 lnc-TNF-104:3
5.2 lnc-ITPR3-9:3