Transcript: lnc-KALRN-4:1

Basic information

LNCipedia transcript ID: lnc-KALRN-4:1 
LNCipedia gene ID: lnc-KALRN-4
Location (hg38): chr3:123997651-124000224
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 639 bp
Exons: 3
Sources: Nielsen et al.,2014
Alternative transcript names: l_2450_chr3:123716497-123719071_testes
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -157.2652 non-coding 
CPAT coding probability 0.18% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-KALRN-4:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-KALRN-4:1
4.0 lnc-KALRN-4:1
4.1 lnc-KALRN-4:1
5.0 lnc-KALRN-4:1
5.1 lnc-SEC22A-9:1
5.2 lnc-KALRN-4:1