Transcript: lnc-WASHC5-12:2

Basic information

LNCipedia transcript ID: lnc-WASHC5-12:2 
LNCipedia gene ID: lnc-WASHC5-12
Location (hg38): chr8:125818245-125819463
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 668 bp
Exons: 2
Sources: Nielsen et al.,2014
Alternative transcript names: l_3679_chr8:126830488-126831707_testes
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -13.2105 non-coding 
CPAT coding probability 0.25% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-WASHC5-12:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-KIAA0196-12:1
4.0 lnc-KIAA0196-12:1
4.1 lnc-KIAA0196-12:1
5.0 lnc-KIAA0196-12:1
5.1 lnc-WASHC5-21:1
5.2 lnc-WASHC5-12:2