Transcript: lnc-TRMT9B-3:1

Basic information

LNCipedia transcript ID: lnc-TRMT9B-3:1 
LNCipedia gene ID: lnc-TRMT9B-3
Location (hg38): chr8:13074852-13075982
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 578 bp
Exons: 3
Sources: Nielsen et al.,2014
Alternative transcript names: l_3552_chr8:12932360-12933491_thyroid
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -27.9005 non-coding 
CPAT coding probability 0.33% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TRMT9B-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-KIAA1456.1-3:1
4.0 lnc-KIAA1456.1-3:1
4.1 lnc-KIAA1456.1-3:1
5.0 lnc-KIAA1456.1-3:1
5.1 lnc-PCM1-42:1
5.2 lnc-TRMT9B-3:1