Transcript: lnc-KIF16B-4:1

Basic information

LNCipedia transcript ID: lnc-KIF16B-4:1 
LNCipedia gene ID: lnc-KIF16B-4
Ensembl Gene ID: ENSG00000225181
Ensembl Transcript ID: ENST00000453972
Location (hg38): chr20:15552157-15552885
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 519 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000453972.1; RP11-388K2.1-001; OTTHUMT00000078094.2; NONHSAT078728
Alternative gene names: ENSG00000225181.1; RP11-388K2.1; OTTHUMG00000031922.2; AL121584.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -183.6309 non-coding 
CPAT coding probability 0.76% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-KIF16B-4:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-KIF16B-4:1
4.0 lnc-KIF16B-4:1
4.1 lnc-KIF16B-4:1
5.0 lnc-KIF16B-4:1
5.1 lnc-RRBP1-44:1
5.2 lnc-KIF16B-4:1