Transcript: lnc-KIF25-1:1

Basic information

LNCipedia transcript ID: lnc-KIF25-1:1 
LNCipedia gene ID: lnc-KIF25-1
Ensembl Gene ID: ENSG00000234768
Ensembl Transcript ID: ENST00000457340
Location (hg38): chr6:168194358-168204501
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 449 bp
Exons: 2
Sources: Broad Institute; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: TCONS_00011416; ENST00000457340; ENST00000457340.1; RP11-503C24.1-001; OTTHUMT00000043187.1; NONHSAT116140
Alternative gene names: XLOC_005543; linc-SMOC2-4; ENSG00000234768; RP11-503C24.1; ENSG00000234768.1; OTTHUMG00000016040.1; AL611929.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score non-coding 
CPAT coding probability 0.01% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-KIF25-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-KIF25-1:1
3.1 lnc-KIF25-1:1
4.0 lnc-KIF25-1:1
4.1 lnc-KIF25-1:1
5.0 lnc-KIF25-1:1
5.1 lnc-SYTL3-100:1
5.2 lnc-KIF25-1:1