Transcript: lnc-KLHL31-2:4

Basic information

LNCipedia transcript ID: lnc-KLHL31-2:4 
LNCipedia gene ID: lnc-KLHL31-2
Location (hg38): chr6:53745692-53793337
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1072 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00012190; NONHSAT113197
Alternative gene names: XLOC_005748; linc-KLHL31-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -56.6152 non-coding 
CPAT coding probability 0.11% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-KLHL31-2:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-KLHL31-2:4
3.1 lnc-KLHL31-2:4
4.0 lnc-KLHL31-2:4
4.1 lnc-KLHL31-2:4
5.0 lnc-KLHL31-2:4
5.1 lnc-GSTA5-15:10
5.2 lnc-KLHL31-2:4