Transcript: lnc-LMF1-4:1

Basic information

LNCipedia transcript ID: lnc-LMF1-4:1 
LNCipedia gene ID: lnc-LMF1-4
Ensembl Gene ID: ENSG00000275438
Ensembl Transcript ID: ENST00000619963
Location (hg38): chr16:848525-849065
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 541 bp
Exons: 1
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000619963.1
Alternative gene names: ENSG00000275438.1; LA16c-360A4.1; AL031008.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -33.7539 non-coding 
CPAT coding probability 1.78% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-LMF1-4:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-LMF1-4:1
4.1 lnc-LMF1-4:1
5.0 lnc-LMF1-4:1
5.1 lnc-PKMYT1-113:1
5.2 lnc-LMF1-4:1