Transcript: lnc-LRR1-5:1

Basic information

LNCipedia transcript ID: lnc-LRR1-5:1 
LNCipedia gene ID: lnc-LRR1-5
Location (hg38): chr14:48398310-48399375
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1066 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT036703
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 1 coding 
Peptide Confidence Reading frame
FLAEEGFYK 100% sense-3
Lee translation initiation sites 0 non-coding 
PhyloCSF score -89.3719 non-coding 
CPAT coding probability 0.66% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-LRR1-5:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-LRR1-5:1
4.0 lnc-LRR1-5:1
4.1 lnc-LRR1-5:1
5.0 lnc-LRR1-5:1
5.1 lnc-AP5M1-127:1
5.2 lnc-LRR1-5:1