Transcript: lnc-LRRC31-1:7

Basic information

LNCipedia transcript ID: lnc-LRRC31-1:7 
LNCipedia gene ID: lnc-LRRC31-1
Ensembl Gene ID: ENSG00000239219
Ensembl Transcript ID: ENST00000600502
Location (hg38): chr3:169949039-169966114
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 1044 bp
Exons: 3
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT093166; ENST00000600502.1
Alternative gene names: ENSG00000239219.2; RP11-379K17.4; AC008040.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -129.1104 non-coding 
CPAT coding probability 2.00% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-LRRC31-1:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-LRRC31-1:7
4.0 lnc-LRRC31-1:7
4.1 lnc-LRRC31-1:7
5.0 lnc-LRRC31-1:7
5.1 lnc-TBL1XR1-56:6
5.2 lnc-LRRC31-1:7