Transcript: lnc-LSG1-2:1

Basic information

LNCipedia transcript ID: lnc-LSG1-2:1 
LNCipedia gene ID: lnc-LSG1-2
Location (hg38): chr3:194844309-194846777
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2081 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00006757; NONHSAT094130
Alternative gene names: XLOC_003387; linc-LSG1-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 7.4162 non-coding 
CPAT coding probability 15.89% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-LSG1-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-LSG1-2:1
3.1 lnc-LSG1-2:1
4.0 lnc-LSG1-2:1
4.1 lnc-LSG1-2:1
5.0 lnc-LSG1-2:1
5.1 lnc-TMEM44-6:2
5.2 lnc-LSG1-2:1