Transcript: lnc-LSR-1:5

Basic information

LNCipedia transcript ID: lnc-LSR-1:5 
LNCipedia gene ID: lnc-LSR-1
Location (hg38): chr19:35206804-35215885
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 274 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT065812
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -156.682 non-coding 
CPAT coding probability 0.97% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-LSR-1:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-LSR-1:5
4.0 lnc-LSR-1:5
4.1 lnc-LSR-1:5
5.0 lnc-LSR-1:5
5.1 lnc-GPR42-13:4
5.2 lnc-LSR-1:5

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