Transcript: lnc-MAFB-2:4

Basic information

LNCipedia transcript ID: lnc-MAFB-2:4 
LNCipedia gene ID: lnc-MAFB-2
Location (hg38): chr20:39656260-39658397
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 432 bp
Exons: 2
Sources: Broad Institute
Alternative transcript names: TCONS_00028668
Alternative gene names: XLOC_013742; linc-KIAA1755-8


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -87.1033 non-coding 
CPAT coding probability 5.78% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MAFB-2:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-MAFB-2:4
3.1 lnc-MAFB-2:4
4.0 lnc-MAFB-2:4
4.1 lnc-MAFB-2:4
5.0 lnc-MAFB-2:4
5.1 lnc-EIF6-61:5
5.2 lnc-MAFB-2:4