Transcript: HDAC2-AS2:103

Basic information

LNCipedia transcript ID: HDAC2-AS2:103 
LNCipedia gene ID: HDAC2-AS2
Location (hg38): chr6:114047891-114054608
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 6011 bp
Exons: 2
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT114598; FPKM1_group_28224_transcript_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -9.237 non-coding 
CPAT coding probability 9.37% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
HDAC2-AS2:103 no no no no

Available literature

  1. Long (2016), Distinct expression profiles of lncRNAs between early-onset preeclampsia and preterm controls., Clin. Chim. Acta


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MARCKS-10:1
4.0 lnc-MARCKS-10:1
4.1 lnc-MARCKS-5:53
5.0 lnc-MARCKS-5:53
5.1 HDAC2-AS2:41
5.2 HDAC2-AS2:103