Transcript: lnc-MBP-11:1

Basic information

LNCipedia transcript ID: lnc-MBP-11:1 
LNCipedia gene ID: lnc-MBP-11
Location (hg38): chr18:77732214-77734473
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 894 bp
Exons: 3
Sources: Nielsen et al.,2014
Alternative transcript names: l_1627_chr18:75444169-75446429_testes
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -1.122 non-coding 
CPAT coding probability 3.31% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MBP-11:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MBP-11:1
4.0 lnc-MBP-11:1
4.1 lnc-MBP-11:1
5.0 lnc-MBP-11:1
5.1 lnc-PQLC1-20:1
5.2 lnc-MBP-11:1