Transcript: lnc-MFSD8-2:1

Basic information

LNCipedia transcript ID: lnc-MFSD8-2:1 
LNCipedia gene ID: lnc-MFSD8-2
Location (hg38): chr4:127618910-127624030
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 295 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00008575; NONHSAT098239
Alternative gene names: XLOC_004069; linc-ANKRD50-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score non-coding 
CPAT coding probability 0.03% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MFSD8-2:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-MFSD8-1:1
3.1 lnc-MFSD8-2:1
4.0 lnc-MFSD8-2:1
4.1 lnc-MFSD8-2:1
5.0 lnc-MFSD8-2:1
5.1 lnc-TRPC3-28:1
5.2 lnc-MFSD8-2:1