Transcript: LINC01638:12

Basic information

LNCipedia transcript ID: LINC01638:12 
LNCipedia gene ID: LINC01638
Location (hg38): chr22:27222892-27226799
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 703 bp
Exons: 4
Sources: NONCODE v4
Alternative transcript names: NONHSAT084579
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 16.4022 non-coding 
CPAT coding probability 10.30% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01638:12 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MN1-6:3
4.0 lnc-MN1-6:3
4.1 lnc-MN1-6:3
5.0 lnc-MN1-6:3
5.1 LINC01638:2
5.2 LINC01638:12