Transcript: lnc-MTDH-3:1

Basic information

LNCipedia transcript ID: lnc-MTDH-3:1 
LNCipedia gene ID: lnc-MTDH-3
Ensembl Gene ID: ENSG00000270077
Ensembl Transcript ID: ENST00000602771
Location (hg38): chr8:97144170-97144723
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 554 bp
Exons: 1
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT127871; ENST00000602771.1
Alternative gene names: ENSG00000270077.1; KB-1958F4.1; AP003117.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -116.9525 non-coding 
CPAT coding probability 0.20% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MTDH-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MTDH-3:1
4.0 lnc-MTDH-3:1
4.1 lnc-MTDH-3:1
5.0 lnc-MTDH-3:1
5.1 lnc-CA2-128:1
5.2 lnc-MTDH-3:1