Transcript: lnc-MYBL2-1:1

Basic information

LNCipedia transcript ID: lnc-MYBL2-1:1 
LNCipedia gene ID: lnc-MYBL2-1
Location (hg38): chr20:43789944-43826362
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2425 bp
Exons: 7
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000446932; ENST00000446932.1; RP5-1030M6.2-001; OTTHUMT00000079326.1; NONHSAT079838
Alternative gene names: ENSG00000225865; RP5-1030M6.2; ENSG00000225865.1; OTTHUMG00000032514.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -50.4781 non-coding 
CPAT coding probability 2.15% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MYBL2-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-MYBL2-1:1
3.1 lnc-MYBL2-1:1
4.0 lnc-MYBL2-1:1
4.1 lnc-MYBL2-1:1
5.0 lnc-MYBL2-1:1
5.1 lnc-STK4-37:1
5.2 lnc-MYBL2-1:1