Transcript: LINC02111:7

Basic information

LNCipedia transcript ID: LINC02111:7 
LNCipedia gene ID: LINC02111
Location (hg38): chr5:17377917-17379202
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1050 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00010279; NONHSAT100628
Alternative gene names: XLOC_004746; linc-MYO10-4


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -87.8695 non-coding 
CPAT coding probability 2.43% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02111:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-MYO10-3:3
3.1 lnc-MYO10-3:3
4.0 lnc-MYO10-3:3
4.1 lnc-MYO10-3:3
5.0 lnc-MYO10-3:3
5.1 LINC02111:4
5.2 LINC02111:7