Transcript: lnc-NDUFB4-1:1

Basic information

LNCipedia transcript ID: lnc-NDUFB4-1:1 
LNCipedia gene ID: lnc-NDUFB4-1
Location (hg38): chr3:120349510-120367998
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 813 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012; Ensembl release 75 - Feb 2014
Alternative transcript names: ENST00000494869.1; RP11-174O3.3-001; OTTHUMT00000355136.1
Alternative gene names: ENSG00000240661.1; RP11-174O3.3; OTTHUMG00000159404.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 57.384 non-coding 
CPAT coding probability 25.47% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-NDUFB4-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-NDUFB4-1:1
4.0 lnc-NDUFB4-1:1
4.1 lnc-NDUFB4-1:1
5.0 lnc-NDUFB4-1:1
5.1 lnc-TIMMDC1-21:4
5.2 lnc-NDUFB4-1:1