Transcript: lnc-NFE2L1-1:1

Basic information

LNCipedia transcript ID: lnc-NFE2L1-1:1 
LNCipedia gene ID: lnc-NFE2L1-1
Location (hg38): chr17:48108054-48111211
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 3158 bp
Exons: 1
Sources: Nielsen et al.,2014
Alternative transcript names: ucscGeneNc_uc002ist_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -30.0756 non-coding 
CPAT coding probability 2.78% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NFE2L1-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-NFE2L1-1:1
4.0 lnc-NFE2L1-1:1
4.1 lnc-NFE2L1-1:1
5.0 lnc-NFE2L1-1:1
5.1 lnc-ACSF2-68:1
5.2 lnc-NFE2L1-1:1