Transcript: lnc-NOC4L-2:2

Basic information

LNCipedia transcript ID: lnc-NOC4L-2:2 
LNCipedia gene ID: lnc-NOC4L-2
Ensembl Gene ID: ENSG00000256312
Ensembl Transcript ID: ENST00000535242
Location (hg38): chr12:132190213-132190997
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 391 bp
Exons: 2
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000535242; ENST00000535242.1; RP13-977J11.8-001; OTTHUMT00000399003.1
Alternative gene names: ENSG00000256312; RP13-977J11.8; ENSG00000256312.1; OTTHUMG00000168261.1; AC138466.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 1.312 non-coding 
CPAT coding probability 0.22% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NOC4L-2:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-NOC4L-2:2
3.1 lnc-NOC4L-2:2
4.0 lnc-NOC4L-2:2
4.1 lnc-NOC4L-2:2
5.0 lnc-NOC4L-2:2
5.1 lnc-NOC4L-2:2
5.2 lnc-NOC4L-2:2